CDS

Accession Number TCMCG005C01206
gbkey CDS
Protein Id XP_020241577.1
Location join(17798458..17798505,17799889..17800058,17800538..17800645,17802274..17802341,17802897..17802967,17803067..17803111,17803189..17803248,17811082..17811142,17812326..17812438,17812917..17813032,17813201..17813299,17813692..17813767,17813865..17813953,17814184..17814247,17814329..17814430,17821433..17821514,17821700..17821764,17822790..17822939)
Gene LOC109819968
GeneID 109819968
Organism Asparagus officinalis

Protein

Length 528aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA376608;
db_source XM_020385988.1
Definition splicing factor U2af large subunit A-like isoform X1

EGGNOG-MAPPER Annotation

COG_category A
Description Necessary for the splicing of pre-mRNA
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12837        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000243        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0008187        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0030628        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0036002        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071004        [VIEW IN EMBL-EBI]
GO:0071010        [VIEW IN EMBL-EBI]
GO:0089701        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGGGTACGAGGATCGCTACGAAGATCGGTCCTCAAGTCGCAAGCATAGTTCCCGAGGGTTTGAGCAAGACATGTCTAGGATGAGGGAGAGCAAAAGAGACAGGGGAAGAGATCGTGAACGCCATCATCGAGAGAACCACAAAGATAGAAAGGATGACAGAGGAAGAGACAGATATGAAGACAATGACCATCATCACAGTCGAAATAATGGGCGGTACCAGGACAATGATCATAATAGAGATAGAAGACATGGGCATAGTTTTCTCTCGAAAGAAAGATCTAGAAATAGATCTCGATCACGTTCACATTCACCTGCGAAAAGCAAAAGGACAAGTGGGTTTGACATGGCTCCTCCTGGTGCCACTGTGCTGCCTAGTGCTGCTGTTGCAGGTGAGCTGCCTAATGTTCCTCAACCAATGACTGGTCTGTTTACTCCCATGGTTCCTCTTGCTGCCCAACAGTTTGGATCCTTTCCAATGATGCCAGCACAATCAATGACTCAGCAGGCAACAAGACATGCGCGACGGGTATATGTTGGTGGCCTTCCTCCCATGGCAAATGAACAGACAATTGCTACATTTTTTAGCCAAATTATGTCCAGTATAGGGGGAAATTCAGCTGGCCAAGGTGATGCTGTTGTTAATGTATACATAAATCATGAAAAGAAGTTTGCTTTTGTGGAGATGAGATCAGTGGAGGAAGCGAGTAATGCAATGGCCTTGGATGGGATCATATTTGAGGGGGTTTCAGTGAGAGTTAGAAGACCCACTGACTACAATCCTTCATTGGCGGCAACACTTGGACCTAGCCAACCAAGTCCTTATCTAAACCTAGCTGCTGTTGGTCTCACACCAGGTGCTCTTGGTGGAGCTGAGGGACCTGAACGCATTTTTGTAGGTGGTTTGCCATATTACTTCACAGATGGACAAATAAGGGAGCTACTTGAATCTTTTGGACCCCTGCGTGGATTTGACATTGTCAAAGACAGAGACACAGGGAACTCCAAGGGTTATGGATTTTGTGTCTATCAGGATCCATCTGTGACTGATATTGCTTGTGCTGCTCTTAATGGGCTAAAGATGGGAGACAAGACATTAACTGTCCGTCGTGCTACTGCTAGTACTGGGCAAGCAAGACCAGAGCAGGAGTTGATTTTGCAGCAAGCACAGCATATAGCTTTACAGAAAATTGTTTTGCAGACTGGCAGTGCTCCATCTTTTCCTGGAATTGGTTCAGAGTCTATTTCTCCTGTAACCTATCTAACCAAAATTGTGTGCTTAACAGAGGTGGCATCTGTGGATGAGCTTAGAGATGATGATGAATATGAAGAGATACTAGAAGATATGAGGGAAGAAGGCGGAAAGTTTGGTTCACTGCTGAATGTTATCATACCTCGCCCCATATCTGGTGAGACAATTGCTGGAGTTGGAAAGGTGTTCTTAGAATACGCAGATACCACAGGATCAGCGAAAGCAAAGGCTGCTCTCCATGGAAGAAAATTTGGGGACAACATTGTTACTGCAGTCCATTACCCTGAAGAAAGTTTCTCCGTTGGAGATTATGGAGCGGTAACAGTGGGCTAA
Protein:  
MSGYEDRYEDRSSSRKHSSRGFEQDMSRMRESKRDRGRDRERHHRENHKDRKDDRGRDRYEDNDHHHSRNNGRYQDNDHNRDRRHGHSFLSKERSRNRSRSRSHSPAKSKRTSGFDMAPPGATVLPSAAVAGELPNVPQPMTGLFTPMVPLAAQQFGSFPMMPAQSMTQQATRHARRVYVGGLPPMANEQTIATFFSQIMSSIGGNSAGQGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGVSVRVRRPTDYNPSLAATLGPSQPSPYLNLAAVGLTPGALGGAEGPERIFVGGLPYYFTDGQIRELLESFGPLRGFDIVKDRDTGNSKGYGFCVYQDPSVTDIACAALNGLKMGDKTLTVRRATASTGQARPEQELILQQAQHIALQKIVLQTGSAPSFPGIGSESISPVTYLTKIVCLTEVASVDELRDDDEYEEILEDMREEGGKFGSLLNVIIPRPISGETIAGVGKVFLEYADTTGSAKAKAALHGRKFGDNIVTAVHYPEESFSVGDYGAVTVG